Explore a selection of works produced by the Department of Computer Science at Michigan Technological University.

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Submissions from 2024

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Work-in-Progress: Preliminary Work Introducing Automated Code Critiques in First-Year Engineering MATLAB Programming, Laura Albrant, Pradnya Pendse, Laura Brown, Jon Sticklen, Michelle E. Jarvie-Eggart, and Leo C. Ureel II

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Work-in-Progress: Python Code Critiquer, a Machine Learning Approach, Laura Albrant, Pradnya Pendse, Danieal Dasker, Laura Brown, Jon Sticklen, Michelle E. Jarvie-Eggart, and Leo C. Ureel II

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Full paper: Exploring Instructors Insight’ to a MATLAB Code Critiquer, Mary Benjamin, Laura Albrant, Michelle E. Jarvie-Eggart, Jon Sticklen, Laura E. Brown, and Leo C. Ureel II

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Engaging Novice Programmers: A Literature Review of the Effect of Code Critiquers on Programming Self-efficacy, Mary E. Benjamin, Laura E. Brown, Jon Sticklen, Leo C. Ureel II, and Michelle E. Jarvie-Eggart

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Size-Constrained Weighted Ancestors with Applications, Philip Bille, Yakov Nekrich, and Solon P. Pissis

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Bringing Our Full Selves Into Computing: Designing, Building, and Fostering Equitable Computing Education Communities, Francisco Enrique Vicente Castro, Earl W. Huff, Amber Solomon, and Briana Christina Bettin

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Security and Privacy in Cyber-Physical Systems and Smart Vehicles, Yu Chen, Chung-Wei Lin, Bo Chen, and Qi Zhu

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A hybrid memory architecture supporting fine-grained data migration, Ye Chi, Jianhui Yue, Xiaofei Liao, Haikun Liu, and Hai Jin

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Generative EO/IR multi-scale vision transformer for improved object detection, Jonathan Christian, Max Bright, Jason Summers, Ashley Olson, and Timothy C. Havens

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The role of peer dialogue as disruptor in critical ethical analysis for computing students, Andrew Ciminski and Charles Wallace

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Enabling Real-Time Restoration of Compromised ECU Firmware in Connected and Autonomous Vehicles, Josh Dafoe, Harsh Singh, Niusen Chen, and Bo Chen

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PATROL: Privacy-Oriented Pruning for Collaborative Inference Against Model Inversion Attacks, Shiwei Ding, Lan Zhang, Miao Pan, and Xiaoyong Yuan

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Beyond Summer Reading: Enabling Covert Student Learning Through a Cross-Campus Connecting Theme, Laura Fiss, Brett Hamlin, Heather Love, Linda Ott, Charles Wallace, and Steven A. Walton

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Improving FlexType: Ambiguous Text Input for Users with Visual Impairments, Dylan Gaines and Keith Vertanen

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Benchmarking a Wide Range of Unsupervised Learning Methods for Detecting Anomaly in Blast Furnace, Kendai Itakura, Dukka Bahadur, and Hiroto Saigo

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FSPDE: A Full Stack Plausibly Deniable Encryption System for Mobile Devices, Jinghui Liao, Niusen Chen, Lichen Xia, Bo Chen, and Weisong Shi

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SeGDroid: An Android malware detection method based on sensitive function call graph learning[Formula presented], Zhen Liu, Ruoyu Wang, Nathalie Japkowicz, Heitor Murilo Gomes, Bitao Peng, and Wenbin Zhang

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Using Reinforcement Learning to Escape Automatic Filter-based Adversarial Example Defense, Yantao Li, Kaijian Dan, Xinyu Lei, Huafeng Qin, Shaojiang Deng, and Gang Zhou

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On the Inference of Original Graph Information from Graph Embeddings, Yantao Li, Xinyang Li, Xinyu Lei, Huafeng Qin, Yiwen Hu, and Gang Zhou

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For those who don't know (how) to ask: Building a dataset of technology questions for digital newcomers, Evan Lucas, Kelly S. Steelman, Leo Ureel, and Charles Wallace

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Sum-of-Local-Effects Data Structures for Separable Graphs, Xing Lyu, Travis Gagie, Meng He, Yakov Nekrich, and Norbert Zeh

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Towards the Development of an Automated Assessment System for the Fundamentals of Laparoscopic Surgery Tests, Mohsen Mohaidat, Fatemeh Rashidi Fathabadi, Koloud Alkhamaiseh, Janos Grantner, Saad A. Shebrain, and Ikhlas Abdel-Qader

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A Novel Approach for Specification and Verification of Symmetric Distributed Algorithms Using SPIN, Leila Namvaritazehkand and Ali Ebnenasir

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FlashGNN: An In-SSD Accelerator for GNN Training, Fuping Niu, Jianhui Yue, Jiangqiu Shen, Xiaofei Liao, and Hai Jin

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LEVERAGING LARGE PRETRAINED MODELS FOR LINE-BY-LINE SPOKEN PROGRAM RECOGNITION, Sadia Nowrin and Keith Vertanen

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Leveraging Large Pretrained Models for Line-by-Line Spoken Program Recognition, Sadia Nowrin and Keith Vertanen

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LMCrot: An enhanced protein crotonylation site predictor by leveraging an interpretable window-level embedding from a transformer-based protein language model, Pawel Pratyush, Soufia Bahmani, Suresh Pokharel, Hamid D. Ismail, and Dukka Bahadur

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Hardware-Software Collaborative Tiered-Memory Management Framework for Virtualization, Sai Sha, Chuandong Li, Xiaoying Lin Wang, Zhenlin Wang, and Yingwei Luo

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Board 348: Poster - Unified Regular Expression Antipattern Language (UREAL), Joseph Teahen, Daniel Masker, Leo Ureel, Laura Brown, Michelle Jarvie-Eggart, and Jon Sticklen

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Extending the Usability of WebTA with Unified ASTs and Errors, Joseph Roy Teahen, Daniel T. Masker, Leo C. Ureel II, Michelle E. Jarvie-Eggart, Jon Sticklen, and Laura Brown

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Breaking Digital Barriers: Designing a Sociotechnical System for Remote Digital Assistance, Kirk Thelen, Timothy Lawrence Perr, Briana C. Bettin, Kelly S. Steelman, Leo C. Ureel, and Charles Wallace

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Current Progress of Providing Rich Immediate Critique of Anti-patterns in Student Code, Leo Ureel, Laura E. Brown, Michelle Jarvie-Eggart, Jon Sticklen, Laura Albrant, Mary Benjamin, and et. al.

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A Simple Mobile Plausibly Deniable System Using Image Steganography and Secure Hardware, Lichen Xia, Jinghui Liao, Niusen Chen, Bo Chen, and Weisong Shi

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Influence of room-temperature oxidation on stability and performance of reactively sputtered TaN thin films for high-precision sheet resistors, Mingzhen Zhang, Yue Wang, Shangzhi Song, Ruiqiang Guo, Wenbin Zhang, Chengming Li, Junjun Wei, Puqing Jiang, and Ronggui Yang

Submissions from 2023

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Language Model Personalization for Improved Touchscreen Typing, Jiban Krishna Adhikary and Keith Vertanen

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Challenges, Choice, & Change: Experiences and Reflections from the First Semester of a Technology and Human Futures Course, Briana Christina Bettin

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Pedagogical Prisms: Toward Domain Isomorphic Analogy Design for Relevance and Engagement in Computing Education, Briana Christina Bettin and Linda Ott

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More (Sema|Meta)phors: Additional Perspectives on Analogy Use from Concurrent Programming Students, Briana Christina Bettin, Linda Ott, and Julia Hiebel

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Say What You Meme: Exploring Memetic Comprehension Among Students and Potential Value of Memes for CS Education Contexts, Briana Christina Bettin, Andrea Sarabia, Maritza Chiolino Gonzalez, Isabella Gatti, Chethan Magnan, Noah Murav, Robin Vanden Heuvel, Duncan McBride, and Sophia Abraham

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A Usability Study of Nomon: A Flexible Interface for Single-Switch Users, Nicholas Bonaker, Emli Mari Nel, Keith Vertanen, and Tamara Broderick

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HiPDS: A Storage Hardware-Independent Plausibly Deniable Storage System, Niusen Chen and Bo Chen

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A Cross-layer Plausibly Deniable Encryption System for Mobile Devices, Niusen Chen, Bo Chen, and Weisong Shi

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A household-scale life cycle assessment model for understanding the food-energy-water nexus, Jessica Daignault, Charles Wallace, David Watkins, Robert Handler, Yi Yang, Danielle Heaney, and Sonya Ahamed

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FlexType: Flexible Text Input with a Small Set of Input Gestures, Dylan Gaines, MacKenzie M. Baker, and Keith Vertanen

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Establishing Physical and Chemical Mechanisms of Polymerization and Pyrolysis of Phenolic Resins for Carbon-Carbon Composites, Ivan Gallegos, Josh Kemppainen, Jacob R. Gissinger, Malgorzata Kowalik, Adri van Duin, Kristopher E. Wise, S. Gowtham, and Gregory Odegard

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Mitigating cross-client GANs-based attack in federated learning, Hong Huang, Xinyu Lei, and Tao Xiang

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Privacy-Preserving Travel Time Prediction for Internet of Vehicles: A Crowdsensing and Federated Learning Approach, Hongyu Huang, Cui Sun, Xinyu Lei, Nankun Mu, Chunqiang Hu, Chao Chen, Huaqing Li, and Yantao Li

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Fair-DSP: Fair Dynamic Survival Prediction on Longitudinal Electronic Health Record, Xin Huang, Xiangyang Meng, Ni Zhao, Wenbin Zhang, and Jianwu Wang

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Shortest Path Problems with a Crash Risk Objective, Qiong Hu, Amir Mehdizadeh, Alexander Vinel, Miao Cai, Steven E. Rigdon, Wenbin Zhang, and Fadel M. Megahed

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Regulation of regeneration in Arabidopsis thaliana, Md Khairul Islam, Sai Teja Mummadi, Sanzhen Liu, and Hairong Wei

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A Deep Neural Network-Based Communication Failure Prediction Scheme in 5G RAN, Mohammad Ariful Islam, Hisham Siddique, Wenbin Zhang, and Israat Haque

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Bioinformatics: A Practical Guide to Next Generation Sequencing Data Analysis, Hamid D. Ismail

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Reconstructing 42 Years (1979–2020) of Great Lakes Surface Temperature through a Deep Learning Approach, Miraj Kayastha, Tao Liu, Daniel Titze, Timothy C. Havens, Chenfu Huang, and Pengfei Xue

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Two kinds of average approximation accuracy, Qingzhao Kong, Wanting Wang, Dongxiao Zhang, and Wenbin Zhang

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The Effects of Robot Voices and Appearances on Users' Emotion Recognition and Subjective Perception, Sangjin Ko, Jaclyn A. Barnes, Jiayuan Dong, Chung Hyuk Park, Ayanna Howard, and Myounghoon Jeon

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Understanding Adoption Barriers to Dwell-Free Eye-Typing: Design Implications from a Qualitative Deployment Study and Computational Simulations, Per Ola Kristensson, Morten Mjelde, and Keith Vertanen

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Experimental Study: Deep Learning-Based Fall Monitoring among Older Adults with Skin-Wearable Electronics, Yongkuk Lee, Suresh Pokharel, Asra Al Muslim, Dukka KC, Kyoung Hag Lee, and Woon Hong Yeo

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Privacy-Preserving Federated Learning with Malicious Clients and Honest-but-Curious Servers, Junqing Le, Di Zhang, Xinyu Lei, Long Jiao, Kai Zeng, and Xiaofeng Liao

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Multi-modal knowledge graph inference via media convergence and logic rule, Feng Lin, Dongmei Li, Wenbin Zhang, Dongsheng Shi, Yuanzhou Jiao, Qianzhong Chen, Yiying Lin, and Wentao Zhu

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Graph Neural Networks Based Memory Inefficiency Detection Using Selective Sampling, Pengcheng Li, Yixin Guo, Yingwei Luo, Xiaolin Wang, Zhenlin Wang, and Xu Liu

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A Scalable Real-time Semantic Segmentation Network for Autonomous Driving, Jun Liu, Chao Wu, Geng Yuan, Wei Niu, Wenbin Zhang, and Houbing Herbert Song

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Towards Inference of Original Graph Data Information from Graph Embeddings, Xinyang Li, Xinyu Lei, Yantao Li, Huafeng Qin, and Yiwen Hu

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Cluster Validity for Fuzzy Text Segmentation, Evan Lucas and Timothy C. Havens

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Facilitating the Bootstrapping of a New ISA, Abigail Mortensen, Scott Pomerville, David Whalley, Soner Onder, and Gang Ryung Uh

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Formal Specification, Verification and Repair of Contiki's Scheduler, Hassan Mousavi, Ali Ebnenasir, and Elham Mahmoudzadeh

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4D Range Reporting in the Pointer Machine Model in Almost-Optimal Time, Yakov Nekrich and Saladi Rahul

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Programming by Voice: Exploring User Preferences and Speaking Styles, Sadia Nowrin and Keith Vertanen

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LMNglyPred: prediction of human N-linked glycosylation sites using embeddings from a pre-trained protein language model, Subash C. Pakhrin, Suresh Pokharel, Kiyoko F. Aoki-Kinoshita, Moriah R. Beck, Tarun K. Dam, Doina Caragea, and Dukka KC

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LMPhosSite: A Deep Learning-Based Approach for General Protein Phosphorylation Site Prediction Using Embeddings from the Local Window Sequence and Pretrained Protein Language Model, Subash C. Pakhrin, Suresh Pokharel, Pawel Pratyush, Meenal Chaudhari, Hamid D. Ismail, and Dukka KC

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DFT-aided machine learning-based discovery of magnetism in Fe-based bimetallic chalcogenides, Dharmendra Pant, Suresh Pokharel, Subhasish Mandal, Dukka KC, and Ranjit Pati

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HIL Demonstration of Energy Management Strategy for Real World Extreme Fast Charging Stations with Local Battery Energy Storage Systems, Yugandhara Yuvraj Patil, Daniel Dobrzynski, Bryan Nystrom, Zhouquan Wu, and Bo Chen

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Integrating Embeddings from Multiple Protein Language Models to Improve Protein O-GlcNAc Site Prediction, Suresh Pokharel, Pawel Pratyush, Hamid D. Ismail, Junfeng Ma, and Dukka KC

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Hydrogen peroxide-dependent oxidation of ERK2 within its D-recruitment site alters its substrate selection, Anthony E. Postiglione, Laquaundra L. Adams, Ese S. Ekhator, Anuoluwapo E. Odelade, Supriya Patwardhan, Meenal Chaudhari, Avery S. Pardue, Anjali Kumari, William A. LeFever, Olivia P. Tornow, Tamer S. Kaoud, Johnathan Neiswinger, Jun Seop Jeong, Derek Parsonage, Kimberly J. Nelson, Dukka KC, Cristina M. Furdui, Heng Zhu, Andrew J. Wommack, Kevin N. Dalby, Ming Dong, Leslie B. Poole, Jeremiah D. Keyes, and Robert H. Newman

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pLMSNOSite: an ensemble-based approach for predicting protein S-nitrosylation sites by integrating supervised word embedding and embedding from pre-trained protein language model, Pawel Pratyush, Suresh Pokharel, Hiroto Saigo, and Dukka KC

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Exploring Scalable Parallelization for Edit Distance-Based Motif Search, Junqiao Qiu and Ali Ebnenasir

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MEMORIAL ENTREPRENEURSHIP AND THE POLITICAL ECONOMIES OF FOOD-BASED LIVING MEMORY, Mark Rhodes and Julianna Bartoszek

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A Non-Reference Evaluation of Underwater Image Enhancement Methods Using a New Underwater Image Dataset, Ashraf Saleem, Sidike Paheding, Nathir Rawashdeh, Ali Awad, and Navjot Kaur

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vTMM: Tiered Memory Management for Virtual Machines, Sai Sha, Chuandong Li, Yingwei Luo, Xiaolin Wang, and Zhenlin Wang

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vTMM: Tiered Memory Management for Virtual Machines, Sai Sha, Chuandong Li, Yingwei Luo, Xiaoying Lin Wang, and Zhenlin Wang

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When Good Turns Evil: Encrypted 5G/4G Voice Calls Can Leak Your Identities, Jingwen Shi, Tian Xie, Guan Hua Tu, Chunyi Peng, Chi Yu Li, Andrew Hou, Sihan Wang, Yiwen Hu, Xinyu Lei, Min Yue Chen, Li Xiao, and Xiaoming Liu

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Analysis of image filtering based on different types of rank filters, Ahmad Al Turk, Saif Najdawi, Mohammad Otair, and Serein Al-Ratrout

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Dissecting Operational Cellular IoT Service Security: Attacks and Defenses, Sihan Wang, Tian Xie, Min Yue Chen, Guan Hua Tu, Chi Yu Li, Xinyu Lei, Po Yi Chou, Fucheng Hsieh, Yiwen Hu, Li Xiao, and Chunyi Peng

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Multi-Tenant In-memory Key-Value Cache Partitioning Using Efficient Random Sampling-Based LRU Model, Yuchen Wang, Junyao Yang, and Zhenlin Wang

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Preventing Discriminatory Decision-making in Evolving Data Streams, Zichong Wang, Nripsuta Saxena, Tongjia Yu, Sneha Karki, Tyler Zetty, Israat Haque, Shan Zhou, Dukka KC, Ian Stockwell, Xuyu Wang, Albert Bifet, and Wenbin Zhang

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FG2 AN: Fairness-Aware Graph Generative Adversarial Networks, Zichong Wang, Charles Wallace, Albert Bifet, Xin Yao, and Wenbin Zhang

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Towards Fair Machine Learning Software: Understanding and Addressing Model Bias Through Counterfactual Thinking, Zichong Wang, Yang Zhou, Meikang Qiu, Israat Haque, Laura Brown, Yi He, Wenbin Zhang, and et al.

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FLORIA: A Fast and Featherlight Approach for Predicting Cache Performance, Jun Xiao, Yaocheng Xiang, Xiaolin Wang, Yingwei Luo, Andy Pimentel, and Zhenlin Wang

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Enabling Accurate Data Recovery for Mobile Devices Against Malware Attacks, Wen Xie, Niusen Chen, and Bo Chen

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RACE: An Efficient Redundancy-aware Accelerator for Dynamic Graph Neural Network, Hui Yu, Yu Zhang, Jin Zhao, Yujian Liao, Zhiying Huang, Donghao He, Lin Gu, Hai Jin, Xiaofei Liao, Haikun Liu, Bingsheng He, and Jianhui Yue

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Secure Redactable Blockchain With Dynamic Support, Di Zhang, Junqing Le, Xinyu Lei, Tao Xiang, and Xiaofeng Liao

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Federated Learning for IoT Devices with Domain Generalization, Liling Zhang, Xinyu Lei, Yichun Shi, Hongyu Huang, and Chao Chen

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Fairness with censorship and group constraints, Wenbin Zhang and Jeremy C. Weiss

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Object Fingerprint Cache for Heterogeneous Memory System, Fang Zhou, Song Wu, Jianhui Yue, Hai Jin, and Jiangqiu Shen

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Handling Data Heterogeneity for IoT Devices in Federated Learning: A Knowledge Fusion Approach, Xu Zhou, Xinyu Lei, Cong Yang, Yichun Shi, Xiao Zhang, and Jingwen Shi

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A new method incorporating deep learning with shape priors for left ventricular segmentation in myocardial perfusion SPECT images, Fubao Zhu, Longxi Li, Jinyu Zhao, Chen Zhao, Shaojie Tang, Jiaofen Nan, Yanting Li, Zhongqiang Zhao, Jianzhou Shi, Zenghong Chen, Chuang Han, Zhixin Jiang, and Weihua Zhou

Works from 2022

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Bioinformatic Analyses of Peroxiredoxins and RF-Prx: A Random Forest-Based Predictor and Classifier for Prxs, Hussam AL-Barakati, Robert H. Newman, Dukka KC, and Leslie B. Poole

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Convolution neural network for identification of obstructive sleep apnea, Serein Al-Ratrout and Abdulnasir Hossen

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Preparing First-Year Engineering Students to Think About Code: A Guided Inquiry Approach, Briana Christina Bettin, Michelle E. Jarvie-Eggart, Kelly S. Steelman, and Charles Wallace

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Identifying and Addressing Risks in the Early Design of a Sociotechnical System through Premortem, Briana Christina Bettin, Kelly S. Steelman, Charles Wallace, Dana Pontious, and Elizabeth Veinott

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A Performance Evaluation of Nomon: A Flexible Interface for Noisy Single-Switch Users, Nicholas Ryan Bonaker, Emli Mari Nel, Keith Vertanen, and Tamara Broderick